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Coliform in Well Water: What to Do After a Positive Test

Guide type
How-to
Last reviewed
2026-11-04
Sources
14 cited
Lab-tested by us
No. How we research

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Short answer

If the result shows E. coli, stop drinking the water untreated today: boil it for 1 minute or use bottled water, and call your local public health unit. If it shows total coliforms only, agencies differ: Health Canada says you can keep using the water while you retest, while Public Health Ontario, Minnesota and Alberta say to stop drinking it or boil it. Then retest, find how the bacteria get in, shock chlorinate, and retest again. If they keep coming back, add continuous disinfection such as a Class A UV system.

First: E. coli, or total coliforms only?

Total coliforms live in soil, on plants and in feces; finding them means surface water may be reaching your well1,2. E. coli comes from human and animal feces1. Penn State puts it plainly: a positive E. coli result is much more serious than coliforms alone3.

Your result · what agencies say to do now
ResultWhat it meansWhat to do now
E. coli present (1 or more)Human or animal waste is reaching the well2Stop drinking it untreated: boil or use another safe source until tests show it is safe1. Contact your public health unit as soon as possible2
Total coliforms onlyThe water “might not be safe to drink”; more information is needed1Agencies differ (see below). Retest as soon as possible1
Total coliforms, Ontario lab, more than 5Significant bacterial contamination2Stop using the well water, contact public health, resample2
Total coliforms, Ontario lab, 5 or less, no E. coliNo significant contamination2Keep testing regularly2
Counts are colony-forming units per 100 mL. Ontario's lab counts; many labs report only present or absent.

Where agencies disagree: total coliforms only. Health Canada says you can continue to use your water while you wait for further results1. Minnesota says to use boiled, bottled or other safe water for drinking and cooking until you address the issue4, and Alberta says not to drink it without boiling it first5. Our take: boil until the retests come back clean, especially if a baby, an older adult, someone pregnant or someone with a weak immune system lives in the house. These are the groups Minnesota lists as more at risk4.

Water you can use in the meantime

  • Boil it for 1 minute at a rolling boil6,7. At high elevation, boil longer: British Columbia says 2 minutes above 2,000 m (6,500 ft)8, the US EPA 3 minutes above 5,000 ft9.
  • Not if nitrate or arsenic were also found. Boiling can concentrate them; use bottled water4.
  • Babies and children. While E. coli is present, Québec advises boiled water for ice, baby drinks and food, washing raw food and brushing teeth. Adults can shower while avoiding swallowing the water; give babies and children sponge baths7.

If someone in the house has stomach illness that may come from the well, Health Canada says to talk to your doctor and local health unit1.

The steps, in order

  1. Retest. Health Canada says to test a second sample as soon as possible. If it is clean, test a third to confirm. If the second or third confirms contamination, shock disinfect the well and fix the cause1. Penn State suggests asking the lab for a counted result rather than present or absent3.
  2. Find how the bacteria get in. Use the checklist below. Don’t skip this step: shock chlorination kills the bacteria but does not close the path they used.
  3. Fix it, then shock chlorinate. Our shock chlorination guide has the doses and steps.
  4. Retest after shocking. Health Canada considers the treatment probably successful after 2 safe tests in a row over 1 to 3 weeks, with one more test 3 to 4 months later6.
  5. If it comes back, add continuous disinfection. Health Canada suggests treatment when the problem is recurrent or you can’t identify or remove the source6.

Finding the cause

Health Canada’s yearly well check10:

  • the well cap is securely in place and watertight, with no cracks;
  • the vent is screened and not blocked;
  • the ground slopes away from the well, with no pooling or settling around the casing;
  • a trimmed grassy area of at least 3 metres (10 ft) around the well, with nothing else in it;
  • no gaps around the casing, and no leaky connections between the well and the house.

Alberta adds the simplest cause of all: a sample that was not collected properly5. Higher-risk wells, according to Minnesota, include dug wells with leaking walls, wells with corroded casing, wells at the bottom of old frost pits, and wells too close to a septic system or feedlot4.

How close is too close? Rules for new wells set minimum distances to septic systems:

Minimum distance between a new well and a septic system
WhereSeptic tankLeaching bed / drain field
Ontario15 m (50 ft)15 m with watertight casing at least 6 m deep; otherwise 30 m (100 ft)11
British Columbia15 m from a holding tank30 m from a sewerage system12
Minnesota50 ft50 ft, doubled for a well with less than 50 ft of watertight casing13
These rules apply when a well or septic system is built. Older wells may be closer: if yours is, mention it to your health unit.

If it comes back: continuous disinfection

The two usual options are continuous chlorination and UV light. Penn State notes that UV adds no chemical but leaves no residual: it kills bacteria only inside the unit3.

For a well with bacteria, the UV unit must be certified to NSF/ANSI 55 Class A. Class B units deliver a lower dose and are only for water that is already safe; Ohio’s health department notes that such units can clear the total coliform indicator without being enough for many other pathogens14. Penn State also advises against UV when total coliforms exceed 1,000 or fecal coliforms 100 per 100 mL3.

UV units certified NSF/ANSI 55 Class A in our catalogue
ModelClass A flowMaker
LUMINOR BlackComb (LB6-15XA)7.9 gpmLUMINOR, Guelph, ON
VIQUA PRO1010 gpmVIQUA, Guelph, ON
UV Pure Hallett 500PN16.5 gpmUV Pure, Toronto, ON
Rated flow at the Class A dose, from the NSF listing, checked November 2026. All four are made in Canada and sold mostly through dealers.

UV needs clear water to work, so most wells need a filter and sometimes a softener ahead of it. Our UV systems guide covers sizing, pretreatment limits and upkeep.

Questions

Can I shower if my well has coliform bacteria?

Québec allows adults to shower or bathe while E. coli is present, taking care not to swallow the water, and advises sponge baths for babies and young children. Use boiled or bottled water for drinking, cooking, ice, baby food and brushing teeth.

Is a positive total coliform test dangerous?

Not always by itself: British Columbia says total coliforms may not mean the water is unsafe, but they show a path for contamination into the well. E. coli is different: it comes from human or animal feces, and British Columbia calls it an immediate health concern.

Why did my well test positive after heavy rain?

Penn State found the highest bacteria counts after several weeks of rainy weather, and fewer than half of 38 coliform-positive wells still tested positive in a dry spell a year later. Rain carries surface water into wells that have a gap, which is exactly what you need to find and fix.

Does boiling water remove nitrate or arsenic?

No. The Minnesota Department of Health warns that boiling can concentrate nitrate and arsenic, so if those were also found, use bottled water instead.

Do I need a UV system after a positive coliform test?

Not after a single positive. Health Canada suggests treatment when the problem is recurrent or the source can't be found or removed. Fix the well and shock chlorinate first; add UV if the bacteria come back.

Bottom line

Treat E. coli as an emergency and total coliforms as a warning. Boil or buy water until two clean retests, find the gap that lets surface water in, fix it, then shock chlorinate. If the bacteria return anyway, a UV unit certified to NSF/ANSI 55 Class A, sized to your pump and placed after the filters, is the usual next step.

Related guides

What we checked, and what we didn't

Checked
  • What to do for each result, on Health Canada, Ontario, Québec, British Columbia, Alberta and Minnesota pages
  • Well-to-septic distances in the Ontario, British Columbia and Minnesota rules
  • UV classes and limits in NSF listings and manufacturer manuals
Not checked
  • Your well: how the bacteria got in can only be found on site
  • Québec's current setback distances: the regulation was amended in 2025 and 2026; ask your municipality
  • Whether a given UV unit suits your water: that depends on your test results

Sources

  1. Well water and health: Test your well water · Health Canada
  2. Well Water Testing: Understand Your Results · Public Health Ontario
  3. Coliform Bacteria · Penn State Extension
  4. Bacterial Safety of Well Water · Minnesota Department of Health
  5. Understanding your drinking water bacteria test results · MyHealth Alberta (Alberta Health Services)
  6. Well water and health: Treat your well water · Health Canada
  7. The Quality of My Well Water · Gouvernement du Québec, ministère de l'Environnement
  8. Disinfecting drinking water, HealthLinkBC File #49b · HealthLinkBC
  9. Emergency Disinfection of Drinking Water · U.S. EPA
  10. Well water and health: Protect and maintain your well · Health Canada
  11. Water Supply Wells: Requirements and Best Practices, Chapter 4: Siting a well · Ontario Ministry of the Environment, Conservation and Parks
  12. Sewerage System Regulation, B.C. Reg. 326/2004 · Province of British Columbia
  13. Isolation Distances From a Water-Supply Well · Minnesota Department of Health
  14. Ultraviolet Light for Continuous Disinfection · Ohio Department of Health

Revision history

2026-11-04First version, built from Health Canada, Ontario, Québec, British Columbia, Alberta, Minnesota and Penn State guidance.